Browse of TCMCG011C21228 protein

CDS

Accession Number	TCMCG011C21228
gbkey	CDS
Protein Id	XP_021906765.1
Location	complement(join(272049..272268,273470..273782,274716..274745,274748..274984,274987..276808))
Gene	LOC110821280
GeneID	110821280
Organism	Carica papaya

Protein

Length	875aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA264084
db_source	XM_022051073.1
Definition	LOW QUALITY PROTEIN: phytochrome B-like [Carica papaya]

EGGNOG-MAPPER Annotation

COG_category	T
Description	Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG]
KEGG_ko	ko:K12121        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04712        [VIEW IN KEGG] map04712        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009657        [VIEW IN EMBL-EBI] GO:0009658        [VIEW IN EMBL-EBI] GO:0009902        [VIEW IN EMBL-EBI] GO:0009903        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0019750        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051640        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051644        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0051656        [VIEW IN EMBL-EBI] GO:0051667        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTTCAGATAGCAGAGCAGCACATACACAGGATCCACATCGCCATCGCCACCATAGCAACCAACCTCAGTCCTCCGGCACCAGCAATCTTAGACCGCAGACGAACACAGACTCCATTAGCAAAGCCATTGCTCAGTATACAGTGGATGCGCGGCTCCACGCAGTTTTCGAGCAATCCGGTGAGTCAGGTAAGTCTTTTGACTACTCTCAGTCGCTAAAAACCACCACGCAATCCGTCCCTGAGCAGCAAATTACCGCTTATTTGTCGAAAATTCAACGTGGCGGCCACATACAGCCTTTTGGTTGCATGATAGCAGTCGATGAAGCTTCTTTTCGCATCATTGCATGCAGCGAAAACGCCCGGGAAATGCTCGGCTTGACCCCCCAATCAGTGCCTAGTCTCGATAATCCTGAGATTTTGACAATTGGGACCGATGTGCGGACCCTTTTTACGCCCTCCAGTGCCGTTTTGCTGGAGAGGGCGTTTGGGGCGCGGGAAATCACGTTGTTGAATCCGGTTTGGATTCACTCGAAAAATTCTGGGAAACCCTTCTACGCTATTTTGCACAGGATCGATGTGGGTATTGTGATTGACTTGGAGCCTGCGAGGACAGAGGACCCTGCCCTGTCTATTGCAGGGGCTGTGCAGTCACAGAAGTTAGCCGTGCGTGCAATTTCCCAGTTGCAGTCGCTTCCTGGCGGGGATATTAAACTCTTATGTGACACTGTTGTAGAGTGTGTGAAGGAGCTTACTGGGTACGATAGAGTCATGGTGTATAAGTTTCATGAAGATGAGCATGGTGAGGTTGTAGCTGAGAGCAAGAGGCCTGACTTGGAGCCTTATATTGGGTTGCATTATCCGGCCACGGATATCCCTCAGGCCTCAAGATTCTTGTTCAAGCAGAATAGGGTTAGGATGATAGTGGATTGCCACGCCACGCCTGTGCGCGTTATTCAGGATGAAGGGCTTATGCAGCCTCTCTGCCTGGTGGGTTCAACTCTTCGGGCTCCTCATGGTTGCCATGCTCAGTACATGGCAAACATGGGTTCAATTGCCTCTTTGGCCATGGCAGTTATCATTAATGGAAGCGATGAGGAAACTACTGGAGGGAGGAATCCAACAAGGCTTTGGGGTCTGGTTGTTTGCCATCACACTTCTTCTCGCTGCATTCCCTTTCCCCTCCGGTATGCTTGTGAGTTCTTAATGCAGGCTTTTGGACTGCAATTGAACATGGAGTTGCAGTTGGCATCACAGATGTCAGAGAAACGGGTTTTGAGGACCCAGACTCTCCTGTGTGATATGCTTCTTCGTGACTCTCCTACTGCCCTTGTTACTCAAAGTCCCAGCATAGTGGATCTAGTTAAATGTGATGGGGCAGCTCTCTATTACCAAGGGAAGTACTATCCTGTTGGTGTGACCCCAACTGAGACACAGATAAAGGATATCATGGAGTGGTTGAAGGCATACCATGGGGACTCCACAGGTCTAAGTACAGATAGTCTGGCCGATGCTGGATATCCTGGAGCAGCCTCCCTTGGTGATGCTGTTTGTGGGATGGCTGTTGCTTATATCACCAAACGAGATTTTCTATTCTGGTTCCGATCTCATACTGCAAAAGAGGTCAAGTGGGGAGGTGCAAAGCATCACCCTGAAGAAAAAGATGATGGACAAAGGATGCATCCTCGTTCCTCATTTAAGGCTTTTCTGGAAGTTGTTAAGAGCCGTAGTCTGCCATGGGAGAATGCTGAAATGGATGCCATTCACTCCTTGCAGCTTATTCTCCGAGACTCCTTTAGAGATGCTGAAGCAAGCAATTCTACTGTTGTGCATTCCCAACTTGGGGATCTGGACTTGCAAGGAATTGATGAGCTCAGCTCGGTTGCCAGGGAAATGGTGAGGTTAATTGAGACTGCGAATGCTCCCATATTTGCTGTAGATGTTGATGGTCGTATAAACGGATGGAATGCAAAGGTTGCCGAGCTAAACAGGCTTTCAGTTGAGGGAGATATGCGAAAATCCGTGGTTTCGGATATAAATTACAAGGAATATGAAGAAACAGACAAGCTCCTTTCTCGTGCAATAAACATTATGAGCTTGTTGATTAGTTCACTGGAGCTTGACAAGGCTGAATTTTTCCTCGGGAGTGTCATAAATGCCGTTGTTAGCCAAGTAATGATCCTACTGAGAGAGAGAAATCTGCAGTTGATTCGAGATATTCCAGAAGAAATCAAGACACTAGCTGTATATGGCGATCAGGCAAGATTGCAACAGGTTTTGGCTGATTTTTTATTGAATATGGTGCATTATGCACCATCTACAGAAGGTTGGGTAGAGATTCACGTCCGTCCAATACTGAAGCAAATTTCTGATGGACTTATCATTGTTCATATAGAATTCAGGATGGTATGCCCTGGTGAAGGTCTACCTCCCGAACTGGTTCAAGATATGTTCCATAGCAATCAGTGGATGACTCAGGAGGGTTTAGGGCTCAGCATGTGCAGGAAGATTCTAAAGCTAATGAATGGTGAAGTACAGTATATCAGAGAATCAGAACGATGCTATTTCTTAATTATTCTTGAACTTCCAATGCCCCGAAGAGGTTCAAAGAGTGTTGGCTAG

Protein:   MTSDSRAAHTQDPHRHRHHSNQPQSSGTSNLRPQTNTDSISKAIAQYTVDARLHAVFEQSGESGKSFDYSQSLKTTTQSVPEQQITAYLSKIQRGGHIQPFGCMIAVDEASFRIIACSENAREMLGLTPQSVPSLDNPEILTIGTDVRTLFTPSSAVLLERAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVECVKELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGSDEETTGGRNPTRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKRVLRTQTLLCDMLLRDSPTALVTQSPSIVDLVKCDGAALYYQGKYYPVGVTPTETQIKDIMEWLKAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITKRDFLFWFRSHTAKEVKWGGAKHHPEEKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEASNSKXVVHSQLGDLDLQGIDELSSVAREMVRLIETANAPIFAVDVDGRINGWNAKVAELNRLSVEGDMRKSVVSDINYKEYEETXDKLLSRAINIMSLLISSLELDKAEFFLGSVINAVVSQVMILLRERNLQLIRDIPEEIKTLAVYGDQARLQQVLADFLLNMVHYAPSTEGWVEIHVRPILKQISDGLIIVHIEFRMVCPGEGLPPELVQDMFHSNQWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIILELPMPRRGSKSVG